Difference between revisions of "Computational Biology"
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* [http://www.bioclipse.net/ Bioclipse] | * [http://www.bioclipse.net/ Bioclipse] | ||
| − | + | == Standards == | |
* [http://biomodels.net/miriam/ MIRIAM] is a standard for annotating models | * [http://biomodels.net/miriam/ MIRIAM] is a standard for annotating models | ||
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* [http://www.mas.ncl.ac.uk/~ncsg3/microarray/ Analysing yeast time course microarray data] by [http://www.mas.ncl.ac.uk/~ncsg3/ Colin Gillespie] | * [http://www.mas.ncl.ac.uk/~ncsg3/microarray/ Analysing yeast time course microarray data] by [http://www.mas.ncl.ac.uk/~ncsg3/ Colin Gillespie] | ||
| + | |||
| + | == Genome Assembly etc == | ||
| + | |||
| + | * [http://sourceforge.net/apps/mediawiki/wgs-assembler/ wgs] (aka Celera Assembler / CABOG) | ||
| + | * [http://sourceforge.net/apps/mediawiki/mira-assembler/ mira] | ||
| + | * [http://cortexassembler.sourceforge.net/ cortex] | ||
| + | * [http://www.ebi.ac.uk/~zerbino/velvet/ velvet] | ||
== Databases etc == | == Databases etc == | ||
Revision as of 03:42, 16 August 2012
Computational Biology is an interdisciplinary field of science which, on the one hand, uses computing to analyse biological systems and, on the other hand, investigates biological systems as computing systems.
Contents
Information Theory in Computational Biology
- Tom Schneider: 70% efficiency of bistate molecular machines explained by information theory, high dimensional geometry and evolutionary convergence
Computational Biology Software
Standards
- MIRIAM is a standard for annotating models
Gene Expression Analysis
Genome Assembly etc
Databases etc
