Difference between revisions of "Computational Biology"

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* [http://www.cytoscape.org/ cytoscape]
 
* [http://www.cytoscape.org/ cytoscape]
 
* [http://www.bioclipse.net/ Bioclipse]
 
* [http://www.bioclipse.net/ Bioclipse]
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* [http://exon.niaid.nih.gov/cas/ dCAS cDNA Annotation System]
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* [http://www.gridqtl.org.uk/ gridqtl]
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* [https://sourmash.readthedocs.io/en/latest/ Sourmash] tools for MinHash based sketches of genomic sequences
  
  
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* [http://code.google.com/p/pysam/ pysam]
 
* [http://code.google.com/p/pysam/ pysam]
 
* [http://bamview.sourceforge.net/ BamView]
 
* [http://bamview.sourceforge.net/ BamView]
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== Databases etc ==
 
== Databases etc ==

Latest revision as of 10:18, 6 September 2018

Computational Biology is an interdisciplinary field of science which, on the one hand, uses computing to analyse biological systems and, on the other hand, investigates biological systems as computing systems.

Information Theory in Computational Biology


Computational Biology Software


R Packages / Collections

  • BioConductor
  • adegenet is a package for exploratory analysis of genetic data, such as genome wide SNPs etc.

Standards

  • MIRIAM is a standard for annotating models


Gene Expression Analysis


Genome Assembly etc


Databases etc


Related Stuff